Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Article
  • Published:

Phenological sensitivity to climate across taxa and trophic levels

Abstract

Differences in phenological responses to climate change among species can desynchronise ecological interactions and thereby threaten ecosystem function. To assess these threats, we must quantify the relative impact of climate change on species at different trophic levels. Here, we apply a Climate Sensitivity Profile approach to 10,003 terrestrial and aquatic phenological data sets, spatially matched to temperature and precipitation data, to quantify variation in climate sensitivity. The direction, magnitude and timing of climate sensitivity varied markedly among organisms within taxonomic and trophic groups. Despite this variability, we detected systematic variation in the direction and magnitude of phenological climate sensitivity. Secondary consumers showed consistently lower climate sensitivity than other groups. We used mid-century climate change projections to estimate that the timing of phenological events could change more for primary consumers than for species in other trophic levels (6.2 versus 2.5–2.9 days earlier on average), with substantial taxonomic variation (1.1–14.8 days earlier on average).

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Climate sensitivity profiles.
Figure 2: Climatic change in the UK, 1960–2012.
Figure 3: Upper and lower limits of phenological climate sensitivity.
Figure 4: Upper and lower limits of phenological climate sensitivity for broad taxonomic groups.
Figure 5: Estimated phenological shifts by the 2050s.

Similar content being viewed by others

References

  1. IPCC. Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change 1132 (Cambridge Univ. Press, 2014)

  2. Parmesan, C. & Yohe, G. A globally coherent fingerprint of climate change impacts across natural systems. Nature 421, 37–42 (2003)

    Article  CAS  ADS  Google Scholar 

  3. Root, T. L. et al. Fingerprints of global warming on wild animals and plants. Nature 421, 57–60 (2003)

    Article  CAS  ADS  Google Scholar 

  4. Both, C., van Asch, M., Bijlsma, R. G., van den Burg, A. B. & Visser, M. E. Climate change and unequal phenological changes across four trophic levels: constraints or adaptations? J. Anim. Ecol. 78, 73–83 (2009)

    Article  Google Scholar 

  5. Visser, M. E., Holleman, L. J. M. & Gienapp, P. Shifts in caterpillar biomass phenology due to climate change and its impact on the breeding biology of an insectivorous bird. Oecologia 147, 164–172 (2006).

  6. Burthe, S. et al. Phenological trends and trophic mismatch across multiple levels of a North Sea pelagic food web. Mar. Ecol. Prog. Ser. 454, 119–133 (2012)

    Article  ADS  Google Scholar 

  7. Jonsson, T. & Setzer, M. A freshwater predator hit twice by the effects of warming across trophic levels. Nat. Commun. 6, 5992 (2015)

    Article  CAS  ADS  Google Scholar 

  8. Thackeray, S. J. et al. Trophic level asynchrony in rates of phenological change for marine, freshwater and terrestrial environments. Glob. Change Biol. 16, 3304–3313 (2010)

    Article  ADS  Google Scholar 

  9. Visser, M. E. & Both, C. Shifts in phenology due to global climate change: the need for a yardstick. Proc. R. Soc. Lond. B 272, 2561–2569 (2005)

    Article  Google Scholar 

  10. Walpole, M. et al. Ecology. Tracking progress toward the 2010 biodiversity target and beyond. Science 325, 1503–1504 (2009)

    Article  Google Scholar 

  11. Butchart, S. H. M. et al. Global biodiversity: indicators of recent declines. Science 328, 1164–1168 (2010)

    Article  CAS  ADS  Google Scholar 

  12. Williams, S. E., Shoo, L. P., Isaac, J. L., Hoffmann, A. A. & Langham, G. Towards an integrated framework for assessing the vulnerability of species to climate change. PLoS Biol. 6, e325 (2008)

    Article  Google Scholar 

  13. Post, E. & Forchhammer, M. C. Climate change reduces reproductive success of an Arctic herbivore through trophic mismatch. Philos. Trans. R. Soc. B Biol. Sci. 363, 2367–2373 (2008)

    Article  Google Scholar 

  14. Thackeray, S. J., Jones, I. D. & Maberly, S. C. Long-term change in the phenology of spring phytoplankton: species-specific responses to nutrient enrichment and climatic change. J. Ecol. 96, 523–535 (2008)

    Article  Google Scholar 

  15. Doi, H., Gordo, O. & Katano, I. Heterogeneous intra-annual climatic changes drive different phenological responses at two trophic levels. Clim. Res. 36, 181–190 (2008)

    Article  Google Scholar 

  16. Visser, M. E., van Noordwijk, A. J., Tinbergen, J. M. & Lessells, C. M. Warmer springs lead to mistimed reproduction in great tits (Parus major). Proc. R. Soc. Lond. B 265, 1867–1870 (1998)

    Article  Google Scholar 

  17. van de Pol, M. & Cockburn, A. Identifying the critical climatic time window that affects trait expression. Am. Nat. 177, 698–707 (2011)

    Article  Google Scholar 

  18. Ohlberger, J., Thackeray, S., Winfield, I., Maberly, S. & Vøllestad, L. When phenology matters: age–size truncation alters population response to trophic mismatch. Proc. R. Soc. Lond. B 281, 20140938 (2014)

    Article  Google Scholar 

  19. Thackeray, S. J., Henrys, P. A., Jones, I. D. & Feuchtmayr, H. Eight decades of phenological change for a freshwater cladoceran: what are the consequences of our definition of seasonal timing? Freshw. Biol. 57, 345–359 (2012)

    Article  Google Scholar 

  20. Phillimore, A. B., Hadfield, J. D., Jones, O. R. & Smithers, R. J. Differences in spawning date between populations of common frog reveal local adaptation. Proc. Natl Acad. Sci. USA 107, 8292–8297 (2010); correction 109, 5134 (2012)

    Article  CAS  ADS  Google Scholar 

  21. Amano, T., Smithers, R. J., Sparks, T. H. & Sutherland, W. J. A 250-year index of first flowering dates and its response to temperature changes. Proc. R. Soc. Lond. B 277, 2451–2457 (2010)

    Article  Google Scholar 

  22. Feuchtmayr, H. et al. Spring phytoplankton phenology — are patterns and drivers of change consistent among lakes in the same climatological region? Freshw. Biol. 57, 331–344 (2012)

    Article  Google Scholar 

  23. Nussey, D. H., Clutton-Brock, T. H., Albon, S. D., Pemberton, J. & Kruuk, L. E. B. Constraints on plastic responses to climate variation in red deer. Biol. Lett. 1, 457–460 (2005)

    Article  Google Scholar 

  24. Van Emden, H. F. & Harrington, R. Aphids as Crop Pests. 717 (CABI, 2007)

  25. Cook, B. I., Wolkovich, E. M. & Parmesan, C. Divergent responses to spring and winter warming drive community level flowering trends. Proc. Natl Acad. Sci. USA 109, 9000–9005 (2012)

    Article  CAS  ADS  Google Scholar 

  26. Reed, T. E., Grøtan, V., Jenouvrier, S., Sæther, B.-E. & Visser, M. E. Population growth in a wild bird is buffered against phenological mismatch. Science 340, 488–491 (2013)

    Article  CAS  ADS  Google Scholar 

  27. Amano, T. et al. Links between plant species’ spatial and temporal responses to a warming climate. Proc. R. Soc. Lond. B 281, 20133017 (2014)

    Article  Google Scholar 

  28. Miller-Rushing, A. J., Hoye, T. T., Inouye, D. W. & Post, E. The effects of phenological mismatches on demography. Philos. Trans. R. Soc. B 365, 3177–3186 (2010)

    Article  Google Scholar 

  29. Nakazawa, T. & Doi, H. A perspective on match/mismatch of phenology in community contexts. Oikos 121, 489–495 (2012)

    Article  Google Scholar 

  30. Scheffer, M. et al. Creating a safe operating space for iconic ecosystems. Science 347, 1317–1319 (2015)

    Article  CAS  ADS  Google Scholar 

  31. Perry, M. & Hollis, D. The generation of monthly gridded data sets for a range of climatic variables over the UK. Int. J. Climatol. 25, 1041–1054 (2005)

    Article  Google Scholar 

  32. Jones, I. D., Winfield, I. J. & Carse, F. Assessment of long-term changes in habitat availability for Arctic charr (Salvelinus alpinus) in a temperate lake using oxygen profiles and hydroacoustic surveys. Freshw. Biol. 53, 393–402 (2008)

    CAS  Google Scholar 

  33. Elliott, J. M. Numerical changes and population regulation in young migratory trout Salmo trutta in a Lake District stream, 1966–83. J. Anim. Ecol. 53, 327–350 (1984)

    Article  Google Scholar 

  34. Mohseni, O., Stefan, H. G. & Erickson, T. R. A nonlinear regression model for weekly stream temperatures. Wat. Resour. Res. 34, 2685–2692 (1998)

    Article  ADS  Google Scholar 

  35. Rayner, N. A. et al. Global analyses of sea surface temperature, sea ice, and night marine air temperature since the late nineteenth century. J. Geophys. Res. 108, 4407 (2003)

    Article  Google Scholar 

  36. Reid, P. C., Colebrook, J. M., Matthews, J. B. L. & Aiken, J. The Continuous Plankton Recorder: concepts and history, from Plankton Indicator to undulating recorders. Prog. Oceanogr. 58, 117–173 (2003)

    Article  ADS  Google Scholar 

  37. Pope, K. S. et al. Detecting nonlinear response of spring phenology to climate change by Bayesian analysis. Glob. Change Biol. 19, 1518–1525 (2013)

    Article  ADS  Google Scholar 

  38. R Development Core Team. R: A Language and Environment for Statistical Computing (2011)

  39. Wood, S. N. Stable and efficient multiple smoothing parameter estimation for generalized additive models. J. Am. Stat. Assoc. 99, 673–686 (2004)

    Article  MathSciNet  Google Scholar 

  40. Bates, D., Maechler, M. & Bolker, B. lme4: Linear Mixed-Effects Models using S4 Classes (2011)

Download references

Acknowledgements

This work was funded by Natural Environment Research Council (NERC) grant NE/J02080X/1. We thank O. Mountford for assigning species traits for plants, H. Feuchtmayr for extracting plankton data for analysis and N. Dodd for air and water temperature data from the Tarland Burn. We also thank P. Verrier, the staff and many volunteers and contributors, including Science and Advice for Scottish Agriculture, to the Rothamsted Insect Survey (RIS) over the last half century. The RIS is a National Capability strategically funded by BBSRC. The consortium represented by the authorship list hold long-term data that represent a considerable investment in scientific endeavour. Whilst we are committed to sharing these data for scientific research, users are requested to collaborate before publication of these data to ensure accurate biological interpretation.

Author information

Authors and Affiliations

Authors

Contributions

S.J.T. and S.W. conceived and coordinated the study and led writing of the manuscript. P.A.H. developed the analysis routine and wrote statistical code to be applied to all data sets. D.H. extracted all climatic and sea surface temperature data. I.D.J. and E.B.M. calculated water temperatures for lakes and streams, respectively. S.J.T., J.R.B., M.S.B., S.B., P.H., T.T.H., D.G.J., D.I.L., E.B.M. and D.M. led analysis of specific data sets using code from P.A.H. S.A., P.J.B., T.M.B., L.C., T.H.C.-B., C.D., M.E., J.M.E., S.J.G.H., R.H., J.W.P.-H., L.E.B.K., J.M.P., T.H.S., P.M.T., I.W. and I.J.W. derived phenological data for analysis, advised on interpretation, and assisted in assigning species traits. All co-authors commented on the manuscript.

Corresponding author

Correspondence to Stephen J. Thackeray.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Additional information

Reviewer Information Nature thanks D. Inouye, M. Visser and the other anonymous reviewer(s) for their contribution to the peer review of this work.

Extended data figures and tables

Extended Data Figure 1 Limits of phenological temperature sensitivity inclusive of marine plankton data.

ac, Upper and lower limits of phenological temperature sensitivity are quantified as the slope of the relationship between seasonal timing (day of year) and temperature (°C) variation within specific seasonal periods. Limits in temperature sensitivity are shown for all taxa (a) and by trophic level (lower limit, b; upper limit, c). Inverted triangles indicate average sensitivity for all species in each group and curves are probability density plots of species-level variation in sensitivity (n = 379,081).

Extended Data Figure 2 Limits of phenological climate sensitivity for taxonomic groups (top) and trophic levels (bottom), after Monte-Carlo resampling.

a, b, Lower (blue) and upper (red) limits of the sensitivity of phenological events to changes in seasonal temperature (a) and precipitation (b). Coloured circles: responses based upon the full data set. Bars: 2.5th–97.5th percentile responses for each group, based upon 100 draws from the full data set. Data were sampled so that 5, (dotted bar), 20 (solid bar), 50 (dashed bar) and 100 (dot-dashed bar) phenological time series were drawn from each taxonomic group (n = 370,725).

Extended Data Figure 3 Climate sensitivities, based on different time periods.

Top: all data; middle: pre-1980 data; bottom: post-1980 data. Sensitivity is the slope of the relationship between seasonal timing (day of year) and temperature (°C) or precipitation (mm per day). a, b, Limits of temperature (a) and precipitation (b) sensitivity are summarized for all taxa. cf, Lower (c, d) and upper (e, f) limits of temperature (c, e) and precipitation (d, f) sensitivity are shown by trophic level. Inverted triangles: average sensitivity for all species (a, b) or trophic levels (cf). Curves, kernel density plots: probability density distributions of species-level climate sensitivity (that is, the relative likelihood of different climate sensitivities within each species group) (n = 370,725).

Extended Data Figure 4 Limits of phenological climate sensitivity for broad taxonomic groups.

Top, all data; bottom, post-1980 data only. a, b, Lower (blue) and upper (red) limits of the sensitivity of phenological events to seasonal temperature (a) and precipitation (b) change are shown. Coloured circles indicate the median response, and bars show the 5th–95th percentile responses for each group. Sensitivity is quantified by summarizing the species-level (random effects) responses from a mixed effects model including data for all taxa, and with taxonomic group as a fixed effect (n = 370,725).

Extended Data Figure 5 Seasonal windows for CSPs.

ad, Estimated climatic sensitivity at the lower (a, c) and upper (b, d) limits of CSPs for 10,003 phenological series. Grey lines are seasonal time periods (x-axis) within which climatic variables have their most positive or negative correlations with the seasonal timing of each phenological event. The y-axis indicates the slope coefficient for each of these correlations; a measure of climate sensitivity (days change per °C or per mm). Shown are the lower and upper limits of CSPtemp (a and b, respectively) and the lower and upper limits of CSPprecip (c and d, respectively). Inset histograms show seasonal time window length (days) (n = 370,725).

Extended Data Figure 6 Time lags between phenological events and seasonal windows of climate sensitivity.

ad, Frequency histograms showing the time lag (in days) between the mean timing of each phenological event and the end of seasonal windows corresponding to the lower and upper limits of CSPtemp (a and b, respectively) and the lower and upper limits of CSPprecip (c and d, respectively). Peaks at lags of around 1 year are where windows were identified that ended at the mean seasonal timing of an event, but in the previous year, owing to temporal autocorrelation in climate data (n = 370,725).

Extended Data Figure 7 Seasonal windows for CSPs by trophic level.

Estimated climatic sensitivity at the lower and upper limits of CSPs for taxa at each of three trophic levels. Formatting is as in Extended Data Fig. 5. ad, Lower and upper limits of CSPtemp (a and b, respectively) and the lower and upper limits of CSPprecip (c and d, respectively) (n = 370,725).

Extended Data Figure 8 Example CSP.

Temperature sensitivity (CSPtemp) for alderfly (Sialis lutaria) emergence from Windermere, UK. Solid black line: sensitivity of first emergence to water temperature on different days of the year (days change per °C). Grey horizontal lines: 2.5th and 97.5th percentiles of these sensitivity values. Solid orange curve: GAM smoother fitted through the sensitivity values with associated confidence intervals (dashed orange curves). Horizontal bars indicate where GAM confidence intervals exceed the percentiles of the original sensitivity values, indicating seasonal windows at the limits of the climate sensitivity profile (n = 30).

Extended Data Table 1 Modelled relationships between seasonal timing and climate variables for n = 10,003 phenological time series
Extended Data Table 2 Parameter estimates and test statistics from climate–phenology mixed-effects models

Supplementary information

Supplementary Information

This file contains a Supplementary Discussion, a schematic overview of the analytical approach and Supplementary Tables 1-2. (PDF 369 kb)

PowerPoint slides

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Thackeray, S., Henrys, P., Hemming, D. et al. Phenological sensitivity to climate across taxa and trophic levels. Nature 535, 241–245 (2016). https://doi.org/10.1038/nature18608

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nature18608

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing